Subject

Fundamentals of Molecular Biology

1. Course Title Fundamentals of Molecular Biology
Fundamentals of Molecular Biology
2. Code Business Information - 01
3. Study Programme Bioinformatics
4. Organizer of the study programme (unit, institute, department or division) Faculty of Computer Science and Engineering
5. Degree level (first, second, third cycle) Second cycle
6. Academic year / semester 9 / Winter
7. Number of ECTS credits 6
8. Teacher Saso Panov
9. Prerequisites for enrolling in the course
10. Objectives of the course programme (competences) Students should acquire basic and advanced knowledge of molecular biology, the structure and function of biomacromolecules (DNA, RNA, and proteins), and the fundamental processes: replication, transcription, and translation.
11. Course content Introduction - basic concepts and historical overview. Definition of molecular biology. A brief historical overview. The central dogma of molecular biology. DNA molecules as carriers of genetic information; the Avery experiment; the Hershey and Chase experiment. Basic characteristics of the hereditary material; structure of DNA; the Watson-Crick model for the structure of the DNA molecule; structural organization of the DNA molecule in chromosomes; the superspiralized structure of circular DNA molecules; nucleosomal organization of DNA in eukaryotes. DNA replication; the Meselson-Stahl experiment; DNA polymerases; replication initiation; replication fork; elongation; replisome - the molecular machine for DNA replication; specifics of DNA replication in eukaryotes; the replication problem of telomeric ends; termination of DNA replication. Transcription - synthesis of RNA based on the DNA template. Structure and function of RNA molecules. Transcription in prokaryotes; transcription initiation, elongation, and termination in E. coli. Transcription in eukaryotes. Post-transcriptional modifications; processing of the 5' and 3' ends of the primary transcript from protein-coding genes. RNA splicing - excision of introns from the primary RNA transcript; alternative splicing. Translation - protein synthesis. The genetic code. Transfer RNA; amino acid attachment to tRNA. Ribosomes as translational machinery. The process of translation; initiation, elongation, and termination of translation. Proteins - nomenclature, size of protein molecules. Levels of protein structure - primary, secondary, tertiary, and quaternary structure. Structural classification of proteins. Examples of globular, fibrillar, and membrane proteins. Regulation of translation; post-translational events. Post-translational modification of proteins.
12. Learning methods Lectures supported by slide presentations, interactive lectures, exercises (using equipment and software packages), teamwork, case studies, invited guest lecturers, independent preparation and defense of a project assignment and seminar paper, learning in an electronic environment (forums, consultations).
13. Total available time 6 ECTS x 30 hours = 180 hours
14. Distribution of available time 60 + 0 + 45 + 45 + 30 = 180 hours
15. Forms of teaching activities
15.1. Lectures - theoretical instruction 60 hours
15.2. Exercises (laboratory, auditory), seminars, teamwork 0 hours
16. Other forms of activities
16.1. Project assignments 45 hours
16.2. Independent assignments 45 hours
16.3. Home study 30 hours
17. Assessment method
17.1. Tests 15 points
17.2. Seminar paper / project (presentation: written and oral) 45 points
17.3. Activities and learning 15 points
17.4. Final exam 0 points
18. Grading criteria (points / grade)
up to 50 points5 (five) (F)
from 51 to 60 points6 (six) (E)
from 61 to 70 points7 (seven) (D)
from 71 to 80 points8 (eight) (C)
from 81 to 90 points9 (nine) (B)
from 91 to 100 points10 (ten) (A)
19. Requirement for obtaining a signature and taking the final exam Activities completed 15
20. Language of instruction Macedonian and English
21. Method for monitoring the quality of teaching Internal evaluation and survey mechanism
22. Literature
22.1. Required literature
1. Sasho Panov | Fundamentals of Molecular Biology and Molecular Genetics | UKI M | 2014
2. T. A. Brown | Genomes 4, 4th Edition | Garland Science | 2017
3. Jonathan Pevsner | Bioinformatics and Functional Genomics | Wiley-Blackwell | 2015
22.2. Additional literature
No. Author Title Publisher Year