Subject

Computational biology

Course Title

Computational biology
Computational biology

Code

F18L3S151

Study Programme

—

Organizer of the study programme (unit, institute, department or division)

Faculty of Computer Science and Engineering

Degree level (first, second, third cycle)

First Cycle

Academic year / semester

8 / Summer

Number of ECTS credits

Teacher

—

Prerequisites for enrolling in the course

Machine learning

10.

Objectives of the course programme (competences)

The goal of the course is for students to become familiar with the fundamentals of modern techniques in the field of computational biology. Upon completion of the course, candidates will have in-depth knowledge of advanced technologies and methods for computational biology, dynamical systems, and modeling; will be able to understand, analyze, and formulate general problems in the field of computational biology; will be able to successfully apply methods to solve real-world problems; will be able to design, analyze, implement, and evaluate the performance of methods and models in computational biology.

11.

Course content

Introduction to computational biology. Dynamic models with differential equations. Linear models of structured populations. Nonlinear models of interaction. Modeling molecular evolution. Models in genetics. Modeling viral diseases. Conclusion – contemporary trends in computational biology.

12.

Learning methods

Lectures supported by slide presentations, interactive lectures, practical classes (using equipment and software packages), teamwork, case studies, guest lecturers, independent preparation and defence of a project assignment and seminar paper, and learning in an electronic environment (forums and consultations).

13.

Total available time

6 ECTS x 30 hours = 180 hours

14.

Distribution of available time

30 + 45 + 15 + 15 + 75 = 180 hours

15.

Forms of teaching activities

15.1.	Lectures - theoretical instruction	30 hours
15.2.	Exercises (laboratory, auditory), seminars, teamwork	45 hours

16.

Other forms of activities

16.1.	Project assignments	15 hours
16.2.	Independent assignments	15 hours
16.3.	Home study	75 hours

17.

Assessment method

17.1.	Tests	10 points
17.2.	Seminar paper / project (presentation: written and oral)	15 points
17.3.	Activities and learning	10 points
17.4.	Final exam	70 points

18.

Grading criteria (points / grade)

up to 50 points	5 (five) (F)
from 51 to 60 points	6 (six) (E)
from 61 to 70 points	7 (seven) (D)
from 71 to 80 points	8 (eight) (C)
from 81 to 90 points	9 (nine) (B)
from 91 to 100 points	10 (ten) (A)

19.

Requirement for obtaining a signature and taking the final exam

completed activities 15.1 and 15.2

20.

Language of instruction

Macedonian and English

21.

Method for monitoring the quality of teaching

internal evaluation and survey mechanism

22.

Literature

22.1.	Required literature No. Author Title Publisher Year
22.2.	Additional literature No. Author Title Publisher Year